Cheong J, Ravishankar A†, Sharma S†, Parkhurst CN†, Grassmann S, Wingert CK, Laurent P, Ma S, Paddock L, Miranda I, Karakaslar O, Nehar-Belaid D, Thibodeau A, Bale MJ, Kartha VK Yee JK, Mays MY, Jiang C, Daman AW, Martinez de Paz A, Ahimovic D, Ramos V, Lercher A, Nielsen E, Alvarez-Mulett S, Zheng L, Earl A, Yallowitz A, Robbins L, LaFond E, Weidman K, Racine-Brzostek S, Yang HS, Price D, Rendeiro AF, Ravichandran H, Kim H, Borczuk AC, Rice CM, R. Jones B, Schenck EJ, Kaner RJ, Chadburn A, Zhao Z, Pascual V, Elemento O, Schwartz RE, Buenrostro JD,

Niec RE, Barrat FJ, Lief L, Sun JC, Ucar D*, Josefowicz SZ*. (2023) Epigenetic Memory of COVID-19 in Innate Immune Cells and Their Progenitors. Cell. 186(18):3882-3902.e24. († and *equal contribution)

Niec RE*, Chu T*, Schernthanner M*, Gur-Cohen S*, Hidalgo L, Pasolli HA, Luckett KA, Wang Z, Bhalla SR, Cambuli F, Kataru RP, Ganesh K, Mehrara BJ, Pe’er D, Fuchs E. (2022). Lymphatics act as a signaling hub to regulate intestinal stem cell activity. Cell Stem Cell. 29(7):1067-1082.e18. (* equal contribution)

Niec RE, Rudensky AY, Fuchs E. (2021). Inflammatory Adaptation in Barrier Tissues. Cell. 184(13):3361-3375.

Levine AG, Hemmers S, Niec RE, Schizas M, Chaudhry A, Dikiy S, Treuting PM, Rudensky AY. (2017) Stability and function of regulatory T cells expressing the Transcription factor T-bet. Nature. 546(7658):421-425.

Sakaguchi S, Vignali DA, Rudensky AY, Niec RE, Waldmann H. (2013). The plasticity of regulatory T cells. Nat Rev Immunol. 13(6):461-7.

Josefowicz SZ*, Niec RE*, Kim HY, Treuting P, Chinen T, Zheng Y, Umetsu DT, Rudensky AY. (2012). Extrathymically generated regulatory T cells control mucosal TH2 inflammation. Nature. 482(7385):395-9. (*equal contribution)

Weiss JM, Bilate AM, Gobert M, Ding Y, Curotto de Lafaille MA, Parkhurst CN, Xiong H, Dolpady J, Frey AB, Ruocco MG, Yang Y, Floess S, Huehn J, Oh S, Li MO, Niec RE, Rudensky AY, Dustin ML, Littman DR, Lafaille JJ. (2012). Neuropilin 1 is expressed on thymus-derived natural regulatory T cells, but not mucosa-generated induced Foxp3+ T reg cells. J Exp Med. 209(10):1723-42

Rudra D, deRoos P, Chaudhry A, Niec RE, Arvey A, Samstein RM, Leslie C, Shaffer SA, Goodlett DR, Rudensky AY. (2012). Transcription factor Foxp3 and its protein partners form a complex regulatory network. Nat Immunol. 13(10):1010-9.

Meredith MM, Liu K, Darrasse-Jeze G, Kamphorst AO, Schreiber HA, Guermonprez P, Idoyaga J, Cheong C, Yao KH, Niec RE, Nussenzweig MC. (2012). Expression of the zinc finger transcription factor zDC (Zbtb46, Btbd4) defines the classical dendritic cell lineage. J Exp Med. 209(6):1153-65.

Rubtsov YP*, Niec RE*, Josefowicz SZ, Li L, Darce J, Mathis D, Benoist C, Rudensky AY. (2010). Stability of the Regulatory T Cell Lineage in vivo. Science. 329(5999):1667-7. (*equal contribution)

Makaroff LE, Hendricks DW, Niec RE, Fink PJ. (2009). Postthymic maturation influences the CD8 T cell response to antigen. Proc Natl Acad Sci. 106(12):4799-804.

Kraft Z, Derby NR, McCaffrey RA, Niec R, Blay WM, Haigwood NL, Moysi E, Saunders CJ, Wrin T, Petropoulos CJ, McElrath MJ, Stamatatos L. (2007). Macaques infected with a CCR5-tropic simian/human immunodeficiency virus (SHIV) develop broadly reactive anti-HIV neutralizing antibodies. J Virol. 81(12):6402-11.

Niec R, Carvalho TL, Mucida D. (2023). Climate change: it’s on us too. Nat Immunol. 24(9):1395. doi: 10.1038/s41590-023-01546-6.

Pasolli HA, Niec RE, Schernthanner M, Gur-Cohen S, Fuchs E. (2023). Lymphatics and The Intestinal Stem Cell Niche: An Ultrastructural and 3D-Immunofluorescence Study. Microscopy and Microanalysis, Volume 29, Issue Supplement_1, Page 1080, https://doi.org/10.1093/micmic/ozad067.555

Rajan A, Pan Y, Mahtani P, Niec R, Longman R, Gerber J, Lukin D, Scherl E, Battat R. (2023). The Impact of Confounders on Symptom–Endoscopic Discordances in Crohn’s Disease. Crohns Colitis 360. 5(2):otad017. doi: 10.1093/crocol/otad017.